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publications
Using the T-Coffee package to build multiple sequence alignments of protein, RNA, DNA sequences and 3D structures
Published in Nature Protocol, 2011
Recommended citation: J. Taly, C. Magis, G. Bussotti, J. Chang, P. di Tommaso, I. Erb, J. Espinosa-Carrasco, C. Kemena, C. Notredame. Using the T-Coffee package to build multiple sequence alignments of protein, RNA, DNA sequences and 3D structures. Nat Protoc 6, 1669–1682 (2011), DOI: 10.1038/nprot.2011.393 https://www.nature.com/articles/nprot.2011.393
T-Coffee: Tree-Based Consistency Objective Function for Alignment Evaluation
Published in Methods in Molecular Biology, 2013
Recommended citation: C. Magis, J. Taly, G. Bussotti, J. Chang, P. di Tommaso, I. Erb, J. Espinosa-Carrasco, C. Notredame. T-Coffee: Tree-Based Consistency Objective Function for Alignment Evaluation. 2014, Book, DOI: 10.1007/978-1-62703-646-7_7 https://link.springer.com/protocol/10.1007%2F978-1-62703-646-7_7
Principal component analysis of the effects of environmental enrichment and (-)-epigallocatechin-3-gallate on age-associated learning deficits in a mouse model of down syndrome
Published in Frontiers in Behavioral Neuroscience, 2015
Recommended citation: S. Catuara-Solarz*, J. Espinosa-Carrasco*, I. Erb*, K. Langohr, J. R. Gonzalez, C. Notredame, M. Dierssen Principal component analysis of the effects of environmental enrichment and (-)-epigallocatechin-3-gallate on age-associated learning deficits in a mouse model of down syndrome. Frontiers in Behavioral Neuroscience vol. 9 330. 11 Dec. 2015, DOI: 10.3389/fnbeh.2015.00330 https://www.frontiersin.org/articles/10.3389/fnbeh.2015.00330/full
Combined Treatment With Environmental Enrichment and (-)-Epigallocatechin-3-Gallate Ameliorates Learning Deficits and Hippocampal Alterations in a Mouse Model of Down Syndrome
Published in eNeuro, 2016
Recommended citation: S. Catuara-Solarz, J. Espinosa-Carrasco, I. Erb, K. Langohr, J. R. Gonzalez, C. Notredame and M. Dierssen Time-course and dynamics of obesity-related behavioral changes induced by energy-dense foods in mice, eNeuro 19 October 2016, 3 (5) ENEURO.0103-16.2016, DOI: 10.1523/eneuro.0103-16.2016 https://www.eneuro.org/content/3/5/ENEURO.0103-16.2016
Time-course and dynamics of obesity-related behavioral changes induced by energy-dense foods in mice
Published in Addiction Biology, 2018
Recommended citation: J. Espinosa‐Carrasco, A. Burokas, M. Fructuoso, I. Erb, E. Martín‐García, M. Gutiérrez‐Martos, C. Notredame, R. Maldonado, M. Dierssen. Time-course and dynamics of obesity-related behavioral changes induced by energy-dense foods in mice, Addiction Biology, 2018. DOI: 10.1111/adb.12595 https://onlinelibrary.wiley.com/doi/abs/10.1111/adb.12595
Extinction and reinstatement of an operant responding maintained by food in different models of obesity
Published in Addiction Biology, 2018
Recommended citation: A. Burokas*, E. Martín‐García*, J. Espinosa‐Carrasco*, I. Erb, J. McDonald, C. Notredame, M. Dierssen, R. Maldonado. Extinction and reinstatement of an operant responding maintained by food in different models of obesity, Addiction Biology, 2018. DOI: 10.1111/adb.12597 https://onlinelibrary.wiley.com/doi/abs/10.1111/adb.12597
Pergola: Boosting Visualization and Analysis of Longitudinal Data by Unlocking Genomic Analysis Tools
Published in iScience, 2018
Recommended citation: J. Espinosa-Carrasco, I. Erb, T. Hermoso Pulido, J. Ponomarenko, M. Dierssen, C. Notredame, Pergola: Boosting Visualization and Analysis of Longitudinal Data by Unlocking Genomic Analysis Tools, ISCIENCE, Volume 9, Pages 244–257. 2018. DOI: 10.1016/j.isci.2018.10.023 https://www.cell.com/iscience/fulltext/S2589-0042(18)30182-2
Pergola-web: a web server for the visualization and analysis of longitudinal behavioral data using repurposed genomics tools and standards
Published in Nucleic Acid Research, 2019
Recommended citation: J. Espinosa-Carrasco, T. Hermoso Pulido, I. Erb, M. Dierssen, J. Ponomarenko, C. Notredame, Pergola-web: a web server for the visualization and analysis of longitudinal behavioral data using repurposed genomics tools and standards, Nucleic Acids Research, Volume 47, Issue W1, 02 July 2019, Pages W600–W604. DOI: 10.1093/nar/gkz414 https://academic.oup.com/nar/article/47/W1/W600/5491748
Protocol for Measuring Compulsive-like Feeding Behavior in Mice
Published in bio-protocol, 2019
Recommended citation: M. Fructuoso, J. Espinosa‐Carrasco, I. Erb, C. Notredame, M. Dierssen Protocol for Measuring Compulsive-like Feeding Behavior in Mice, Bio-protocol 9(14): e3308. DOI: 10.21769/BioProtoc.3308 https://bio-protocol.org/e3308
talks
Talk 1 on Relevant Topic in Your Field
Published:
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Conference Proceeding talk 3 on Relevant Topic in Your Field
Published:
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teaching
Teaching experience 1
Undergraduate course, University 1, Department, 2014
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Teaching experience 2
Workshop, University 1, Department, 2015
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